SRR3558637.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3558637.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4545989
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	133996	2.9475654252572983	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	64415	1.4169633934441987	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	42881	0.9432710901852162	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23591	0.5189409829192283	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14933	0.3284873764542765	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11400	0.25077051440291653	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10216	0.22472557676668378	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9039	0.19883462102525984	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	8235	0.181148700535791	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	6426	0.1413553794344861	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	6379	0.14032150099791266	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	6188	0.1361199950109866	No Hit
GGTTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5957	0.13103859248229593	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	5024	0.11051500564563618	No Hit
GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA	4719	0.10380579451468096	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	4645	0.10217798591241642	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	1360	63.56163	1
GTATCAA	55415	58.89025	1
TACAACG	945	50.99806	2
TATCAAC	70945	45.932636	2
TATCACG	925	45.66853	2
ATCAACG	72030	45.257267	3
TCACGCA	945	44.700523	4
TCAACGC	74285	44.690907	4
CAACGCA	75630	44.091824	5
AACGCAG	77650	44.04812	6
ATAGTAC	2045	42.4762	4
TAACGCA	1110	42.343838	4
GCATAGT	2185	40.572826	2
ACGCAGA	85730	39.806396	7
CGCAGAG	86630	39.543934	8
ACAACGC	1220	39.502594	3
GTACAAC	1460	37.974846	1
GCAGAGT	90125	37.904823	9
TAGTACT	2300	37.76605	5
GTATCAC	1660	37.350048	1