SRR3558607.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3558607.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1682605
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	53859	3.2009295110854894	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25651	1.5244813845198368	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16769	0.9966094240775464	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9840	0.5848074860112742	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7198	0.42778905328345035	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5088	0.3023882610594881	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3915	0.23267492964777828	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3628	0.21561804463911613	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	2530	0.1503620873585898	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	2449	0.14554812329691164	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	2013	0.11963592168096493	No Hit
GGTTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1984	0.11791240368357399	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	1846	0.10971083528219636	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	1740	0.10341107984345702	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	18275	61.542862	1
CGCATAG	480	53.365463	1
TACAACG	385	51.004494	2
TATCAAC	23835	46.935123	2
ACAACGC	410	46.43898	3
TAACGCA	430	45.662743	4
ATCAACG	24470	45.59149	3
TCAACGC	25115	45.34457	4
TATCACG	330	45.079727	2
CAACGCA	25540	44.753086	5
AACGCAG	26375	44.575695	6
TCACGCA	375	42.83996	4
GTATAAC	520	41.241287	1
GGTATCA	8870	40.631683	1
ATAACGC	530	40.415054	3
ACGCAGA	29155	40.12122	7
CGCAGAG	29555	39.81979	8
GCAGAGT	30870	38.065723	9
AGATTAC	1025	37.154495	2
GTACAAC	660	35.200897	1