SRR3558605.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3558605.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2353933
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	69082	2.9347479303786472	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	34071	1.4474073816034696	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20846	0.8855817051717275	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12755	0.5418590928458881	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10883	0.46233261524435915	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7854	0.3336543563474406	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	7376	0.3133479160196998	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	6030	0.2561670191972329	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5450	0.23152740541043437	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5198	0.22082191804099777	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	3724	0.15820331334834084	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	3240	0.13764198046418485	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	3155	0.13403100258163678	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	2978	0.12651167216738965	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	2687	0.11414938318125452	No Hit
GGTTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2549	0.1082868543837059	No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	2467	0.10480332277936542	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCATTTT	2371	0.10072504187672292	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATCACG	370	49.85725	2
GTATCAA	29375	49.73849	1
TAACGCA	450	42.30983	4
CGCATAG	605	41.36604	1
TACAACG	520	41.19718	2
TATCAAC	36130	40.23684	2
ATCAACG	36770	39.51444	3
TCAACGC	37730	39.108276	4
CAACGCA	38145	38.80758	5
AACGCAG	39140	38.763515	6
ACGCAGA	42665	35.546913	7
CGCAGAG	43090	35.292965	8
TCACGCA	495	34.85753	4
TACTGGT	1795	34.80913	2
GCAGAGT	44740	33.951473	9
GGTTTCA	1240	33.637707	1
ACAACGC	655	32.701298	3
GTACTGG	2140	32.29938	1
ATAGTAC	820	31.92586	4
TTCAACG	1545	30.037924	4