SRR3558572.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3558572.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2363488
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	55307	2.3400584221286507	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27058	1.1448333987733383	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17203	0.7278649182902558	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10586	0.4478973449410363	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10269	0.4344849645947007	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6551	0.2771750903749035	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	4922	0.208251533327015	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4248	0.179734358710516	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4211	0.17816887583097524	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	3233	0.1367893553933847	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	2462	0.10416807701160319	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATCACG	360	61.164066	2
GTATCAA	24300	50.98832	1
CGCATAG	460	47.93651	1
TAACGCA	535	47.821136	4
TACAACG	475	41.34447	2
TATCAAC	30345	40.67417	2
TCAACGC	31170	40.44822	4
ATCAACG	30495	40.3875	3
CAACGCA	31440	40.081932	5
AACGCAG	32345	39.879356	6
TCACGCA	595	36.999004	4
GTATAAC	785	36.441315	1
ACGCAGA	35530	36.22074	7
CGCAGAG	36090	35.807087	8
ACAACGC	560	35.06155	3
GCAGAGT	37490	34.390583	9
ATCACGC	660	33.35516	3
CATGGGT	4060	33.119793	4
GTATCAC	845	31.737907	1
GTACAAC	860	30.491354	1