SRR3558545.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3558545.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1479258
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	32646	2.2069172517573	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16084	1.0873018770221285	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11147	0.7535534707265399	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7093	0.4794971533025341	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6092	0.4118280921921666	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4036	0.2728394911502929	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	3344	0.2260592810719969	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2518	0.17022047540050483	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2277	0.1539285236246821	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	2023	0.13675775287340003	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1712	0.11573369892202712	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	1545	0.10444425516035742	No Hit

Adapter graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TAACGCA	450	52.88166	4
GTATAAC	415	50.274128	1
CGCATAG	300	47.688602	1
GTATCAA	17715	46.840622	1
TATCACG	195	45.769165	2
TACAACG	280	42.49994	2
TATCAAC	21495	38.28257	2
AACGCAG	22340	38.16237	6
TCAACGC	22295	37.4109	4
ATCAACG	21965	37.404175	3
CAACGCA	22510	37.05483	5
ATAACGC	750	35.695126	3
ACGCAGA	24375	34.976303	7
CGCAGAG	24665	34.613304	8
ACAACGC	365	34.2282	3
GCAGAGT	25630	33.28686	9
TAGTACT	530	32.553257	5
ATAGTAC	495	31.248255	4
CATGGGG	4770	31.180225	4
CATGGGT	2285	30.722277	4