SRR3558175.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3558175.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2480706
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	34255	1.380856901220862	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12830	0.517191476942451	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12528	0.5050175232373365	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	8857	0.35703545684172167	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	7540	0.30394573157802657	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6957	0.28044435737245765	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4391	0.17700606198396748	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	4096	0.16511428601373965	No Hit
GTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAAAAAAAAAAAAAAA	3616	0.14576495562150452	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	3529	0.1422578894879119	No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	3403	0.1371786902599502	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	3370	0.13584842379548404	No Hit
TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA	3018	0.12165891484117827	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3002	0.1210139371614371	No Hit
GTATCAACGCAGAGTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAA	2682	0.1081143835666137	No Hit
GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC	2535	0.10218865113399168	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	2483	0.10009247367483289	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	735	63.95258	1
TAGTACT	1050	45.84832	5
ATAGTAC	1055	45.067688	4
TAACGCA	615	43.487564	4
GCATAGT	1190	42.452145	2
AGATTAC	1270	39.31002	2
GATTACT	1335	37.84124	3
TACAACG	640	37.14563	2
ACGGTAC	580	36.88945	3
TATCACG	455	35.26794	2
CATGGGG	8430	33.84086	4
CATAGTA	1495	32.59871	3
CATGGGT	3685	32.095436	4
AACGCAG	43055	31.85636	6
ACAACGC	805	31.008526	3
GTATAAC	790	30.87984	1
CATGGGC	8810	30.492306	4
ACATGGG	40200	30.026974	3
ATAACGC	970	30.02286	3
CACGGTA	735	29.110046	2