SRR3558153.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3558153.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4411747
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	49466	1.1212338332184506	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20103	0.45566982875491274	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15624	0.3541454213036242	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8384	0.1900380960195587	No Hit
GTATCAACGCAGAGTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAA	5318	0.12054181710782598	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4711	0.10678309522282217	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	4677	0.10601242546320086	No Hit
GTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAAAAAAAAAAAAAAA	4604	0.10435775215577865	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	4596	0.10417641809469128	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	45030	46.790237	1
AACGCAG	49120	43.83581	6
TATCAAC	52415	40.290073	2
ATCAACG	52845	39.827263	3
TCAACGC	54020	39.401085	4
CAACGCA	54910	38.784107	5
ACGCAGA	56125	38.319233	7
CGCAGAG	56830	37.906612	8
GCAGAGT	60260	35.748966	9
CGCATAG	780	31.276672	1
GTACATG	49530	30.8502	1
ACATGGG	49145	30.791971	3
TACATGG	50145	30.758715	2
CATGGGG	16235	29.727758	4
GGTATCA	26825	29.63453	1
CATGGGC	13425	28.202236	4
TAACGCA	870	27.327456	4
ATGGGAC	4990	27.038572	5
AGAGTAC	59415	26.970495	10-11
GAGTACT	29295	26.188906	12-13