SRR3558150.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3558150.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3481543
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	49802	1.430457702231453	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18390	0.5282140706003057	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18139	0.5210046235246844	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9978	0.28659706342848557	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	9655	0.27731956778933936	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	9134	0.26235493860049985	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5656	0.16245670382356328	No Hit
GTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAAAAAAAAAAAAAAA	5321	0.1528345334238296	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	5000	0.14361448357811465	No Hit
GTATCAACGCAGAGTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAA	4435	0.1273860469337877	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4227	0.12141168441693811	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	3765	0.10814170613432032	No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	3761	0.10802681454745784	No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3703	0.10636088653795171	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	3678	0.10564281412006114	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3560	0.10225351230761762	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	920	64.01819	1
TAGTACT	1375	43.216934	5
TACAACG	645	42.379402	2
ATAGTAC	1435	40.581753	4
GCATAGT	1510	38.566105	2
CATGGGT	4985	36.595684	4
AGATTAC	1615	36.058712	2
AACGCAG	58145	34.45686	6
TATCACG	630	33.95616	2
CATGGGG	11915	33.71392	4
GTATCAA	60965	31.792635	1
ATGGGTG	3180	30.645971	5
ACGCAGA	65420	30.59478	7
CGCAGAG	65790	30.513018	8
ACATGGG	55235	30.392103	3
CATGGGC	13290	29.644571	4
TACATGG	59490	29.476906	2
TAACGCA	970	29.405336	4
GATTACT	2005	29.341173	3
GTACATG	59475	29.2982	1