SRR3558145.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3558145.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3105856
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	32755	1.0546206907210123	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12652	0.40735951698984113	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	9375	0.30184915205341134	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8082	0.2602181170022049	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	7596	0.244570256959756	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4685	0.15084408291949145	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	4658	0.14997475736157762	No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	4647	0.14962058768983494	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	4035	0.12991587504378826	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	4025	0.12959390261493128	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3573	0.11504074883059615	No Hit
TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA	3551	0.11433240948711079	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	3340	0.10753879123822868	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACAACGC	555	37.477474	3
TACAACG	570	34.406013	2
TAACGCA	705	32.875378	4
CATGGGG	9260	32.08886	4
CGCATAG	485	31.887878	1
AACGCAG	42375	31.425226	6
CATGGGT	4400	31.199997	4
GTATCAA	43755	29.473085	1
ACATGGG	39290	28.980692	3
GTACTGG	2205	28.864843	1
ACGCAGA	46345	28.718615	7
CGCAGAG	46605	28.660395	8
TACTGGT	1930	28.636562	2
GCAGAGT	48785	27.404037	9
ATCAACG	47115	27.308256	3
TCAACGC	47760	27.300308	4
TATCAAC	47325	27.300098	2
CAACGCA	48175	27.18849	5
AGATTAC	1280	26.92857	2
TACATGG	45035	26.880424	2