SRR3557915.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557915.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2393999
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	49821	2.0810785635248803	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21283	0.8890145735232136	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20472	0.8551382018121143	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8703	0.36353398643859086	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5095	0.21282381488045735	No Hit
GTATCAACGCAGAGTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAA	4237	0.17698420091236464	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	3988	0.16658319406148459	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3845	0.16060992506680244	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	3662	0.15296581159808337	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	3641	0.152088618249214	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3058	0.12773606004012533	No Hit
GTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAAAAAAAAAAAAAAA	2947	0.12309946662467278	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC	2867	0.11975777767659886	No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGAT	2707	0.11307439978045103	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	2691	0.11240606199083626	No Hit
GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA	2441	0.10196328402810528	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAA	2428	0.10142025957404326	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	34630	54.239567	1
GACCGTT	555	48.20459	7
AACGCAG	41660	45.4669	6
TATCAAC	42225	44.38259	2
GGACCGT	790	43.64855	6
ATCAACG	43215	43.296146	3
TCAACGC	44255	42.50529	4
CAACGCA	45025	41.817993	5
ACGCAGA	47725	39.71378	7
CGCAGAG	47930	39.53152	8
GCAGAGT	49750	38.073387	9
GGTATCA	18740	37.18939	1
TACTGGT	1835	36.613266	2
GTACTGG	2045	35.505714	1
ACTGGTT	1970	32.896317	3
ATGGGAC	3675	32.840332	5
CATGGGT	5495	32.566242	4
GTACATG	39030	31.961302	1
TACATGG	39175	31.84143	2
ACATGGG	38995	31.652313	3