SRR3557847.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557847.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7085919
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	89316	1.2604716480671032	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	40599	0.5729532047995468	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	34045	0.4804599092933464	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15278	0.21561070624713605	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	11703	0.1651585348350722	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	10636	0.15010050213670237	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	10408	0.1468828531627302	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	9957	0.14051811769228523	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	8820	0.12447221030892394	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7906	0.11157338942203544	No Hit

Adapter graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	84850	40.467728	1
AACGCAG	90745	38.368614	6
CGCATAG	1035	37.385956	1
TACAACG	1275	34.985985	2
TATCAAC	99610	34.380463	2
ACGCAGA	101855	34.20101	7
CGCAGAG	102495	34.057087	8
ATCAACG	100795	33.898365	3
TCAACGC	102640	33.578747	4
CAACGCA	103760	33.257824	5
GCAGAGT	107320	32.531456	9
ACGGTAC	1825	31.610878	3
CATGGGT	12910	30.03648	4
CATGGGG	23790	28.824553	4
GACCGTT	1365	28.757912	7
ACATGGG	83755	28.247612	3
GTACATG	88490	27.770327	1
ACAACGC	1545	27.716072	3
TACATGG	88895	27.618837	2
GGACCGT	1910	26.780037	6