SRR3557838.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557838.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	895894
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12409	1.3850968976240492	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6551	0.7312248993742564	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6444	0.7192815221443608	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2922	0.32615465668929583	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2298	0.2565035595728959	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	2020	0.2254731028447562	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	1435	0.16017519929813126	No Hit
GTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAAAAAAAAAAAAAAA	1282	0.14309728606286012	No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1196	0.13349793613976652	No Hit
GGTTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1141	0.12735881700290436	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1100	0.12278238273724347	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1065	0.11887567055924027	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	957	0.10682067298140181	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	929	0.10369530323899925	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	911	0.10168613697602619	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	275	67.12181	1
TACAACG	200	56.49689	2
AGATTAC	460	50.420567	2
GTATAAC	265	47.185448	1
TAGTACT	380	46.942467	5
ATAGTAC	410	44.957905	4
TATCACG	220	43.25121	2
GGTTTCA	525	43.09818	1
TAACGCA	305	40.939987	4
CATGGGT	1375	39.78445	4
GTACAAC	340	38.528175	1
TCACGCA	250	38.05469	4
GCATAGT	490	37.62414	2
ATGGGTG	780	37.353363	5
TTCAACG	645	36.8747	4
ACATGGG	13180	36.14047	3
GTACATG	13730	35.864902	1
TACATGG	13805	35.712402	2
GATTACT	650	35.68026	3
CATGGGG	3035	35.656685	4