SRR3557833.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557833.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3713265
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	70164	1.8895500321145946	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31630	0.8518110072941198	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27138	0.730839301800437	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14995	0.4038225119941615	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	9506	0.25600112030786926	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	7598	0.20461776899844208	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6808	0.1833426916743082	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	6492	0.17483266074465464	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5720	0.1540423320177795	No Hit
GTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAAAAAAAAAAAAAAA	5532	0.14897940222418815	No Hit
GTATCAACGCAGAGTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAA	5499	0.1480906964625471	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAA	5338	0.14375488956484386	No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4874	0.13125914794661842	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	4616	0.12431108471924303	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	4311	0.11609728904346983	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	4268	0.11493927850557394	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3938	0.10605222088916356	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	850	59.536797	1
TACAACG	660	45.956764	2
AACGCAG	63450	40.251728	6
AGATTAC	1625	39.160984	2
TAGTACT	1400	38.6515	5
AAACGCA	1155	37.58321	5
ATAGTAC	1395	36.658714	4
GTATCAA	68840	36.32402	1
TAACGCA	865	35.74705	4
CGCAGAG	71835	35.660923	8
ACGCAGA	71770	35.58551	7
GCATAGT	1415	35.305794	2
GGTTTCA	1735	35.00146	1
ACAACGC	925	34.071632	3
GCAGAGT	75125	34.051712	9
GTACAAC	1025	33.10827	1
GATTACT	1925	33.053078	3
CATGGGG	13720	32.67911	4
TATCAAC	76580	32.56362	2
TATCACG	715	32.440067	2