SRR3557822.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557822.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4966538
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	76810	1.5465501321040935	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	33831	0.6811787204688659	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30368	0.6114520819129945	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14412	0.290182014111238	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	9029	0.1817966559402143	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6824	0.13739953263218765	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	5867	0.1181305770740101	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5422	0.10917061341320655	No Hit
GTATCAACGCAGAGTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAA	5409	0.10890886166581228	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	5279	0.10629134419186967	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	5142	0.10353288346933015	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	845	45.09411	1
AACGCAG	64180	41.597347	6
GTATCAA	65285	40.427868	1
ACGCAGA	72770	36.695232	7
CGCAGAG	73145	36.531494	8
TATCAAC	74380	35.364834	2
ATCAACG	75220	34.832336	3
GCAGAGT	76905	34.76861	9
TCAACGC	76650	34.59726	4
CAACGCA	77535	34.164017	5
GTACATG	61170	31.389742	1
ACATGGG	59460	31.363361	3
TACATGG	61535	31.168676	2
CATGGGT	6360	30.944956	4
TACAACG	990	30.036245	2
CATGGGG	15745	29.908976	4
GACCGTT	995	29.281412	7
ACAACGC	1120	28.140337	3
GGACCGT	1375	28.10798	6
AGAGTAC	76155	27.568829	10-11