SRR3557761.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557761.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4137657
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	66623	1.610162466342667	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31799	0.7685267290159624	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24415	0.5900682439361213	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14415	0.34838557183449476	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	9186	0.2220097025925542	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	7963	0.19245191179452525	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	6990	0.168936187799037	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6835	0.16519010638146178	No Hit
GTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAAAAAAAAAAAAAAA	5783	0.13976508927637066	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5673	0.13710657988325278	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAA	5172	0.12499827801096128	No Hit
GTATCAACGCAGAGTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAA	5040	0.1218080667392198	No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4712	0.11388087509428646	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	4637	0.11206825505352426	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4460	0.10779047175732547	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4328	0.104600260485584	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	1090	67.161545	1
ATAGTAC	1635	45.091473	4
TACAACG	835	44.150177	2
TAGTACT	1745	41.908314	5
GCATAGT	1835	40.504303	2
ACAACGC	1090	37.636837	3
AGATTAC	2230	37.595985	2
AACGCAG	63245	37.443344	6
TATCACG	800	37.162697	2
TAACGCA	1040	37.159557	4
GATTACT	2405	34.61015	3
CGCAGAG	71110	33.377636	8
GTATCAA	68985	33.28508	1
ACGCAGA	71175	33.279926	7
GTATAAC	1275	33.14288	1
CATGGGT	5890	32.90734	4
CATGGGG	12955	32.67631	4
AGTGTAC	2355	32.567863	3
TCACGCA	940	32.257656	4
AAACGCA	1380	31.881823	5