SRR3557760.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557760.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9307165
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	119556	1.284558724380625	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	59814	0.6426661609630859	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	43376	0.4660495435505871	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24457	0.26277604404778465	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	14606	0.15693285764247222	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	14432	0.15506333024073388	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	14263	0.15324752489076965	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12445	0.13371418686571046	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10405	0.11179558974188167	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	1665	40.03774	1
AACGCAG	115380	38.737503	6
TAACGCA	1865	36.98254	4
GTATCAA	120750	36.150936	1
ACGCAGA	129635	34.427372	7
CGCAGAG	130350	34.330128	8
TACAACG	1660	32.954063	2
GCAGAGT	137300	32.566383	9
CATGGGG	28405	31.901255	4
TATCAAC	137895	31.568296	2
ATCAACG	138375	31.359116	3
TCAACGC	141010	31.245384	4
CAACGCA	142560	31.001593	5
ACATGGG	109830	29.656412	3
GTACATG	113800	29.4673	1
TACATGG	114450	29.197775	2
TATCACG	1615	29.085985	2
CATGGGT	12025	28.926	4
GTATAAC	2580	27.683903	1
ACAACGC	2135	26.735662	3