SRR3557755.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557755.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3247899
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	32742	1.0080978503334002	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14763	0.4545399964715651	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11962	0.3682996300069676	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	7347	0.22620777308653994	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	6305	0.19412549466593634	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5755	0.1771914705475755	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3920	0.12069340826177169	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	3687	0.11351953986253882	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	3287	0.10120388595827642	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	685	40.831593	1
TACAACG	700	36.521732	2
TAACGCA	795	35.89619	4
ACAACGC	755	33.07323	3
AACGCAG	41020	32.94413	6
AAACGCA	1100	31.347982	5
CATGGGT	3560	30.728552	4
GTATCAA	42205	30.442322	1
TATCACG	600	29.726994	2
ACGCAGA	45585	29.566769	7
CGCAGAG	45905	29.45132	8
CATGGGG	10150	28.935781	4
ACATGGG	37420	28.105953	3
GCAGAGT	48265	28.0482	9
GTATAAC	1130	27.385073	1
TCAACGC	48385	27.007925	4
ATCAACG	47515	26.964403	3
GTACAAC	1170	26.957462	1
TATCAAC	47715	26.926554	2
TACATGG	41315	26.89568	2