SRR3557751.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557751.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2237420
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24069	1.0757479597035873	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11809	0.5277954072100902	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9263	0.4140036291800377	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4425	0.19777243432167407	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	4064	0.18163777922786065	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	3130	0.13989326992696946	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2906	0.12988173878842596	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	2672	0.1194232642954832	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	2494	0.11146767258717631	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	2286	0.10217125081567163	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	525	53.290443	1
TAACGCA	485	45.35417	4
ACAACGC	505	37.671753	3
TATCACG	450	35.67044	2
CATGGGT	3705	34.65954	4
AACGCAG	27040	34.254528	6
TCACGCA	480	33.44104	4
AGATTAC	1055	33.24733	2
GTATCAA	26900	32.99409	1
ATAACGC	685	32.97997	3
GTATAAC	705	32.92959	1
ACATGGG	25530	32.64784	3
ACGCATA	275	32.469032	1
TACAACG	595	31.973507	2
GTACATG	27770	31.274488	1
TAGTACT	895	31.21994	5
ATCACGC	515	31.168346	3
TACATGG	28020	31.083271	2
ACGCAGA	30135	30.835073	7
CATGGGG	6730	30.741241	4