SRR3557745.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557745.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2886124
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	32461	1.1247264497298106	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15911	0.5512930144373561	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11653	0.4037595058285784	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	7164	0.2482221831078637	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6375	0.22088448036189715	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	5659	0.1960761214694864	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3862	0.13381268441688576	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	3311	0.11472133560443001	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	3234	0.1120533975671177	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	3100	0.10741049241127547	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3038	0.10526228256304995	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	710	53.647884	1
TATCACG	670	41.705647	2
TAACGCA	735	38.8256	4
TCACGCA	740	37.75986	4
ATAACGC	830	35.814278	3
CATGGGT	3880	33.5565	4
ATCACGC	840	33.26464	3
CATGGGG	8020	32.91341	4
AACGCAG	38360	32.500053	6
GTATAAC	905	32.22393	1
ACAACGC	710	30.98187	3
TACAACG	750	30.915419	2
GTATCAA	39400	30.346926	1
ATCTACG	555	29.994171	2
AGATTAC	1445	29.623505	2
ACGCAGA	42400	29.319223	7
ACGCATA	325	29.300003	1
CGCAGAG	42500	29.22226	8
ACATGGG	35025	29.008696	3
GTATCAC	1130	28.967783	1