SRR3557743.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557743.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2689761
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	42452	1.5782814904372544	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19753	0.7343775153257112	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15667	0.5824681077612472	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7261	0.26994963493038976	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	5014	0.18641061417724475	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4870	0.18105697866836495	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	4687	0.17425340020916358	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	4569	0.16986639333383152	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	4113	0.15291321422237886	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	3661	0.13610874720839508	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3557	0.13224223267420412	No Hit
GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA	3317	0.12331950682607117	No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGAT	2887	0.10733295634816624	No Hit
GTATCAACGCAGAGTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAA	2780	0.10335490774087362	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	36355	41.853317	1
AACGCAG	38375	40.216812	6
TATCAAC	42030	36.12542	2
ATCAACG	42540	35.706295	3
ACGCAGA	43320	35.639767	7
CGCAGAG	43440	35.596058	8
TCAACGC	43315	35.25958	4
CAACGCA	43775	34.916225	5
CGCATAG	480	34.712036	1
GCAGAGT	45530	33.97512	9
GACCGTT	600	33.688293	7
ACATGGG	33600	32.555916	3
CATGGGT	3000	31.904797	4
GTACATG	36060	31.43638	1
TACATGG	35995	31.397228	2
CATGGGG	9700	30.705582	4
TCACGCA	465	30.683836	4
TATCACG	450	30.385519	2
GGACCGT	1040	30.2966	6
GTACTGG	2110	28.766102	1