SRR3557736.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557736.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1775525
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26046	1.466946396136354	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12456	0.7015389814280283	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9390	0.5288576618183354	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4658	0.2623449402289464	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	4592	0.2586277298263894	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	3671	0.20675574829979865	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3219	0.18129848917925684	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	2920	0.16445839962827896	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	2441	0.13748046352487295	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	2345	0.1320736120302446	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2324	0.13089086326579463	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	2282	0.12852536573689471	No Hit
GTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAAAAAAAAAAAAAAA	2201	0.12396333478830206	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	2020	0.11376916686613818	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	1895	0.10672899564917418	No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	1890	0.10644738880049563	No Hit
TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA	1777	0.10008307402036018	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	345	56.941044	1
TAACGCA	425	46.16155	4
GACCGTT	435	39.63365	7
GGACCGT	605	39.306103	6
TCACGCA	360	37.982246	4
AGATTAC	900	37.65197	2
CATGGGT	3070	36.987106	4
TACAACG	410	36.25029	2
ACAACGC	435	35.53362	3
AACGCAG	29855	34.66866	6
TATCACG	390	33.536167	2
GTATCAA	30080	33.08941	1
ACGCAGA	32945	31.43504	7
CGCAGAG	32890	31.433378	8
GTATAAC	625	31.431456	1
ATAGTAC	645	30.416527	4
GCAGAGT	34045	30.384443	9
ATAACGC	765	30.308088	3
GATTACT	1105	30.12875	3
CATGGGG	5880	30.028557	4