SRR3557728.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557728.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4802591
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	59910	1.2474516360023162	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30508	0.6352404358397373	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22486	0.46820559985224647	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10781	0.2244829926179431	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	8547	0.17796643520133196	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	7452	0.15516624255532066	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6117	0.12736874741155346	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5313	0.11062778404407121	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	4852	0.10102879882963176	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AACGCAG	59465	37.400517	6
GTATCAA	59045	36.92857	1
CGCATAG	830	36.566402	1
ACGCAGA	66220	33.522503	7
CGCAGAG	66635	33.376183	8
GCAGAGT	70200	31.672754	9
TATCAAC	68675	31.631933	2
ATCAACG	68640	31.578444	3
TCAACGC	69870	31.430946	4
CAACGCA	70350	31.258745	5
CATGGGG	14330	30.533947	4
TAACGCA	825	29.544811	4
ACATGGG	53615	28.596727	3
GTACATG	56390	28.515001	1
TACATGG	56550	28.332314	2
AGAGTAC	68760	26.67334	10-11
AGTACTT	38365	26.468473	12-13
GTACTGG	2945	25.056854	1
CATGGGC	12865	24.676456	4
CATGGGT	5375	24.111784	4