SRR3557718.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557718.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4353506
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	50160	1.1521748218562233	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23821	0.5471681904193999	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18111	0.4160095334656711	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9062	0.20815407168383368	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	8096	0.18596505896626767	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	7309	0.1678876748992651	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	6281	0.14427452264910168	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	5456	0.12532427886857167	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4987	0.11455135240424615	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4657	0.10697125489203414	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AACGCAG	54105	37.272026	6
GTATCAA	53365	37.161407	1
CGCATAG	750	36.50398	1
ACGCAGA	60600	33.13012	7
CGCAGAG	60875	33.04882	8
TATCAAC	61660	31.973894	2
ATCAACG	62320	31.519342	3
GCAGAGT	64035	31.464348	9
TCAACGC	63185	31.464214	4
CAACGCA	63845	31.194822	5
CATGGGT	6830	30.552797	4
CATGGGG	14255	29.360945	4
ACATGGG	50135	28.092384	3
GACCGTT	740	27.315662	7
GTACATG	54825	26.79231	1
TACATGG	54865	26.76616	2
TACAACG	780	26.67829	2
ACGGTAC	995	26.290216	3
GTACTGG	3055	26.105814	1
CATGGGC	10800	25.817469	4