SRR3557705.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557705.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1912215
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22676	1.1858499175040462	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11369	0.5945461153688262	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8839	0.4622388172878049	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4278	0.2237196131188177	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2551	0.13340550095046844	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	2428	0.1269731698579919	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2419	0.12650251148537167	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2027	0.10600272458902373	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	345	44.84053	1
TATCACG	330	41.430614	2
TACAACG	380	40.67216	2
TAACGCA	315	39.629284	4
AACGCAG	22040	38.109924	6
ACAACGC	395	37.622738	3
GTATCAA	22045	37.00359	1
AGATTAC	895	35.86561	2
CATGGGT	2990	35.785645	4
CATGGGG	6625	35.442036	4
ACATGGG	21930	34.750164	3
GTACATG	22985	34.247734	1
TACATGG	23080	33.99739	2
ACGCAGA	24680	33.98516	7
CGCAGAG	24785	33.889153	8
TCACGCA	400	32.69416	4
GCAGAGT	26090	32.14848	9
ATCAACG	25455	31.969646	3
TATCAAC	25450	31.929216	2
TCAACGC	25840	31.9074	4