SRR3557704.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557704.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4450087
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	57154	1.284334441101938	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28841	0.6480996888375441	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21175	0.4758333938190422	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10544	0.23693918793048313	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	7163	0.16096314521491378	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5583	0.12545822137859328	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	5559	0.12491890607981374	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	5483	0.12321107430034513	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	5308	0.1192785669134109	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5145	0.11561571717586645	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	4995	0.11224499655849425	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4958	0.11141355213954245	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4465	0.10033511704377915	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	725	43.48715	1
GTATCAA	51695	40.25264	1
AACGCAG	54265	38.993923	6
ACGCAGA	61335	34.344093	7
CGCAGAG	61660	34.23055	8
TATCAAC	60545	34.193756	2
ATCAACG	60615	34.193108	3
TCAACGC	61815	33.913948	4
CAACGCA	62335	33.65964	5
ACGGTAC	950	33.160343	3
GCAGAGT	64920	32.566578	9
ACATGGG	51950	32.03607	3
GTACATG	55485	31.156103	1
TACATGG	55475	31.093653	2
CATGGGT	6305	31.015411	4
GGACCGT	1310	29.94604	6
CATGGGG	14130	29.782272	4
CATGGGC	11570	29.077015	4
TATCACG	800	28.976522	2
TACAACG	685	28.634855	2