SRR3557695.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557695.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4393005
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	67398	1.5342117753109774	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	34000	0.773957689554189	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23007	0.5237189577521537	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12208	0.2778963374728688	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	9550	0.21739105691889718	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	7996	0.18201663781397928	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	7259	0.16523996671981936	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	7189	0.163646524417796	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	6566	0.14946488792978838	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6268	0.1426813764154605	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6190	0.14090582642177735	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	5250	0.11950817265174976	No Hit
GTATCAACGCAGAGTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAA	5142	0.11704971881434235	No Hit
GTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAAAAAAAAAAAAAAA	5114	0.11641234189353301	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4917	0.11192793998641021	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4906	0.11167754191037799	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	4854	0.11049384191458922	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	880	41.91456	1
TACAACG	660	41.42564	2
AACGCAG	67040	37.81207	6
GTATCAA	65895	37.422085	1
TAACGCA	895	34.53271	4
CGCAGAG	74595	34.03026	8
ACGCAGA	74585	33.971073	7
TATCAAC	75340	32.59004	2
GCAGAGT	78130	32.54381	9
ATCAACG	76485	32.195045	3
TCAACGC	78520	31.928362	4
CATGGGG	15550	31.72474	4
CAACGCA	79155	31.716919	5
ACATGGG	60345	31.163452	3
GTATAAC	1240	30.705359	1
AGATTAC	1710	30.58735	2
TACATGG	64210	30.176594	2
GTACATG	64495	30.07097	1
ACGGTAC	1170	29.464054	3
CATGGGT	5065	29.33668	4