SRR3557685.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557685.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3272801
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	48455	1.4805360912563885	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23516	0.7185282575995302	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16898	0.5163161463223703	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8442	0.2579441890906291	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4988	0.15240767770481617	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4351	0.13294422728421312	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4342	0.13266923347921245	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3596	0.10987530253137909	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3386	0.10345878041469678	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	37560	45.07055	1
AACGCAG	39275	43.902546	6
ACGCAGA	44055	39.152584	7
CGCAGAG	44340	38.927734	8
TATCAAC	44800	37.773525	2
ATCAACG	45110	37.59128	3
TCAACGC	46130	37.120857	4
GCAGAGT	46925	36.783283	9
CAACGCA	46595	36.69938	5
GTACATG	37020	32.35516	1
ACATGGG	36480	32.227726	3
TACATGG	37195	32.10506	2
CATGGGT	4800	32.071312	4
CGCATAG	515	31.195553	1
CATGGGG	11505	30.58393	4
AGAGTAC	46025	29.87679	10-11
TAACGCA	550	28.097576	4
AGTACTT	26800	27.32336	12-13
GGTATCA	22720	27.15855	1
GGACCGT	845	26.02575	6