SRR3557684.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557684.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3769804
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	74003	1.9630463546645927	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35071	0.9303136184268466	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25491	0.676189000807469	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13303	0.35288306766081207	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	7868	0.20871111601558065	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	6598	0.1750223619052874	No Hit
GTATCAACGCAGAGTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAA	6490	0.17215749147701048	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6480	0.17189222569661447	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5953	0.15791271906974474	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	5782	0.15337667422497298	No Hit
GTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAAAAAAAAAAAAAAA	5539	0.14693071576134992	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	5473	0.14517996161073626	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	5031	0.1334552141172326	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4899	0.1299537058160053	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4861	0.12894569585050045	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAA	4647	0.12326900815002584	No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4461	0.11833506463466005	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	4367	0.11584156629893755	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	750	56.315136	1
AACGCAG	63520	42.302494	6
GTATCAA	63195	41.748314	1
TACAACG	660	38.7238	2
CGCAGAG	70895	37.83482	8
ACGCAGA	70985	37.803596	7
TATCAAC	72250	36.377625	2
GCAGAGT	74275	36.089085	9
ATCAACG	73660	35.769096	3
TCAACGC	75215	35.4168	4
CAACGCA	76050	34.996677	5
TAACGCA	815	34.27537	4
CATGGGG	13950	32.678574	4
CATGGGT	4725	32.453373	4
ACATGGG	56690	31.934885	3
ACAACGC	860	31.790792	3
TACATGG	59255	31.305614	2
GTACATG	59315	31.21067	1
CATGGGC	14580	31.062716	4
GTATAAC	985	30.196861	1