SRR3557677.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557677.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2094199
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24359	1.1631654871385193	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11720	0.5596411802316781	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8741	0.4173910884304691	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4477	0.21378102081034325	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	2924	0.1396237893342514	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2640	0.1260625184139616	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2262	0.10801265782287164	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	2165	0.10338081529023746	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2142	0.10228254334950977	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	375	55.539146	1
TAACGCA	395	40.632412	4
AACGCAG	23675	39.470123	6
GTATCAA	23090	39.043713	1
ACGCAGA	26880	34.78607	7
CGCAGAG	27045	34.639782	8
TATCAAC	26750	33.57977	2
ATCAACG	26995	33.426765	3
TCAACGC	27570	33.160835	4
CAACGCA	27845	32.854683	5
GCAGAGT	28775	32.51586	9
TACAACG	370	32.134037	2
ACATGGG	22630	31.599993	3
CATGGGG	6905	31.42209	4
GTACATG	23745	31.250479	1
TACATGG	23935	31.021732	2
CATGGGT	2780	29.935684	4
ATAGTAC	760	28.157547	4
TAGTACT	810	27.153301	5
AAACGCA	730	26.871815	5