SRR3557630.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557630.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3659393
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28098	0.7678322607055323	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15619	0.42681942059789696	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12837	0.35079588336098366	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5904	0.16133823287086138	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5757	0.15732117321096695	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	4808	0.1313879105086554	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4546	0.12422825315564631	No Hit
CTTATACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGT	3744	0.10231205011322916	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	845	56.327404	1
TATCACG	495	37.25899	2
TAACGCA	775	34.545017	4
AGATTAC	1830	33.4858	2
AACGCAG	37320	31.181843	6
ACATGGG	35920	30.161171	3
TACAACG	730	30.15459	2
GTACATG	38790	29.341454	1
GTATCAA	38405	29.201826	1
TACATGG	39035	29.171741	2
ATAGTAC	1640	29.021557	4
TAGTACT	1680	28.6847	5
GATTACT	2180	28.382551	3
CATGGGG	9985	28.063858	4
CATGGGT	4240	27.922981	4
ACGCAGA	41775	27.885008	7
CGCAGAG	42035	27.797453	8
ACAACGC	825	27.403385	3
GCATAGT	1765	27.303286	2
TCAACGC	42255	26.638979	4