SRR3557615.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557615.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1661901
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17832	1.0729881021793717	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9095	0.5472648491095439	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7418	0.4463563112363492	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	3489	0.20994030330326535	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3473	0.2089775504076356	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2732	0.16439005692878214	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	2682	0.16138145412993915	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2171	0.13063353352576357	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1860	0.11192002411696005	No Hit
GTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAAAAAAAAAAAAAAA	1799	0.10824952870237158	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	1752	0.10542144207145913	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	1740	0.10469937739973681	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	460	54.75416	1
TAACGCA	430	45.615517	4
TACAACG	320	44.5788	2
GTATAAC	600	41.978188	1
TAGTACT	645	40.547123	5
ATAGTAC	635	38.377552	4
ATAACGC	620	35.471302	3
TATCACG	320	35.29155	2
TCACGCA	335	33.71133	4
ACAACGC	415	32.941765	3
AAACGCA	565	32.612217	5
AACGCAG	23325	32.413994	6
AGATTAC	795	32.14907	2
GCATAGT	820	31.168917	2
GTACAAC	640	30.921432	1
CATGGGG	5345	30.692232	4
CATGGGT	2305	30.686201	4
ACATGGG	22090	30.136263	3
CATGGGC	5230	30.003323	4
TTCAACG	1120	29.719198	4