SRR3557605.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557605.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2194359
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22753	1.03688594254632	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11406	0.519787327415432	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9091	0.41428954879306445	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4399	0.20046856507982513	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	4006	0.18255900698108193	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3826	0.17435615594348963	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	3275	0.14924631748952655	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2277	0.10376606562554258	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	545	62.72451	1
TAGTACT	975	42.673256	5
TACAACG	485	40.44218	2
GCATAGT	995	38.231316	2
TAACGCA	665	37.53963	4
TATCACG	370	36.94779	2
ATAGTAC	1095	35.825493	4
GATTACT	1210	32.91181	3
AACGCAG	27540	32.740406	6
GTATAAC	790	32.64377	1
CATGGGG	6225	32.36851	4
AGATTAC	1225	32.0236	2
ACAACGC	625	31.383133	3
GTATCAA	28705	30.148636	1
ACATGGG	25685	29.597383	3
ACGCAGA	30885	29.271431	7
CGCAGAG	30945	29.195469	8
ATAACGC	950	28.780384	3
GTACATG	27475	28.769785	1
CATGGGC	5815	28.722282	4