SRR3557547.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557547.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5612494
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	63241	1.1267896232940293	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	34162	0.6086777108358601	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24533	0.43711405303952217	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11666	0.20785768323315804	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	10981	0.19565277040830686	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	9549	0.17013826651752323	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6637	0.11825402396866704	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6301	0.11226738059764518	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	6262	0.111572502349223	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	5896	0.1050513372486456	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5688	0.1013453199237273	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	1000	47.032063	1
TAACGCA	1140	32.485203	4
AACGCAG	71640	32.43554	6
TACAACG	985	31.629293	2
GTATCAA	71760	31.35307	1
TATCACG	905	29.878521	2
ACGCAGA	79755	29.12788	7
CATGGGG	16720	29.074957	4
CGCAGAG	80130	28.991566	8
CATGGGT	8040	28.58713	4
ACATGGG	63290	28.272188	3
TAGTACT	1835	28.19009	5
ACGGTAC	1165	27.75151	3
GCAGAGT	84090	27.6123	9
TATCAAC	81955	27.413538	2
TCAACGC	82945	27.405254	4
ATCAACG	81620	27.338802	3
CAACGCA	83905	27.20379	5
GTACATG	70285	27.14289	1
TACATGG	70060	27.13437	2