SRR3557519.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557519.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2055568
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22691	1.1038798035384867	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11569	0.5628128089170488	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9482	0.4612836938500697	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	6524	0.3173818623368334	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	5536	0.2693172884574969	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4615	0.22451215430479557	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	3000	0.14594506238664934	No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	2978	0.14487479859581393	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	2846	0.13845321585080134	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2810	0.13670187510216153	No Hit
GTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAAAAAAAAAAAAAAA	2581	0.1255614020066473	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	2563	0.1246857316323274	No Hit
TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA	2459	0.11962630280292358	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2168	0.10546963175141859	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	2161	0.1051290932725164	No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG	2155	0.1048372031477431	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	2120	0.1031345107532322	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2112	0.10274532392020112	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	605	53.10503	1
TAGTACT	790	40.668053	5
TATCACG	425	39.197266	2
ATAGTAC	830	38.708145	4
TAACGCA	495	36.05809	4
TCACGCA	465	35.82546	4
GCATAGT	925	34.732716	2
ATCACGC	490	33.99763	3
GATTACT	1025	33.0855	3
AGATTAC	1035	32.76583	2
CATGGGC	6650	31.403074	4
ACAACGC	380	31.313608	3
TACAACG	385	30.906937	2
AAACGCA	625	30.461878	5
GACCGTT	380	29.747929	7
GTATAAC	590	29.244438	1
CATGGGT	2610	28.950089	4
AACGCAG	33540	28.949682	6
CATAGTA	1170	27.968136	3
GCTTTTG	4135	27.625645	9