SRR3557497.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557497.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2669921
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	36596	1.370677259739146	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19645	0.7357895608147208	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14696	0.550428271098658	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7213	0.27015780616729856	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5589	0.20933203641605877	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	4412	0.16524833506309736	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3767	0.14109031690450766	No Hit
GTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAAAAAAAAAAAAAAA	3441	0.1288802178041972	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	3316	0.12419843133935422	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3191	0.11951664487451126	No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2832	0.10607055414748226	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2693	0.10086440759857689	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	850	53.216003	1
AGATTAC	1315	44.344746	2
TACAACG	490	43.71679	2
TAACGCA	755	40.982483	4
GTATAAC	855	39.6786	1
AACGCAG	35650	38.45318	6
ATAACGC	990	36.663715	3
GATTACT	1615	36.107334	3
CATGGGG	9165	35.773464	4
TATCACG	435	35.565254	2
GTATCAA	37225	35.462917	1
ATAGTAC	1235	35.172054	4
ACATGGG	34360	34.84309	3
GTACATG	35220	34.811718	1
TACATGG	35320	34.721554	2
ACAACGC	645	34.13374	3
ACGCAGA	40160	34.102036	7
CGCAGAG	40345	34.079014	8
GCATAGT	1340	33.7482	2
TAGTACT	1270	33.73169	5