SRR3557451.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557451.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2549942
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29141	1.1428103070579645	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14307	0.5610715851576232	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11433	0.4483631392400298	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5213	0.20443602246639336	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	3572	0.14008161754267354	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3449	0.13525797841676399	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	3284	0.12878724300395852	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	2770	0.108629921778613	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2766	0.10847305546557529	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	2601	0.10200232005276982	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	620	41.277332	1
GTATCAA	27665	39.71329	1
AACGCAG	29170	39.00914	6
CATGGGT	3850	34.78217	4
ACGCAGA	32605	34.75351	7
CGCAGAG	32785	34.6897	8
ACATGGG	29170	34.29779	3
GTACATG	30250	34.076687	1
TACATGG	30465	33.8362	2
ATCAACG	32485	33.619255	3
TATCAAC	32795	33.392204	2
TCAACGC	33320	33.3662	4
CATGGGG	9240	33.043064	4
GCAGAGT	34535	33.000755	9
CAACGCA	33840	32.93883	5
GTATAAC	785	32.601208	1
TAACGCA	640	31.617958	4
CATGGGC	6680	30.381752	4
TACAACG	340	29.758078	2
ATAGTAC	885	28.917456	4