SRR3557433.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557433.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1370401
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16858	1.2301508828437808	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8166	0.5958839784851295	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6965	0.5082453967853205	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3265	0.238251431515301	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2587	0.18877686166311905	No Hit
GTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAAAAAAAAAAAAAAA	2029	0.1480588528467215	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	1975	0.14411840038061852	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1717	0.12529179415368202	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	1483	0.10821650013390241	No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1437	0.10485981840351838	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	420	65.18748	1
TAACGCA	365	48.919727	4
ATAGTAC	590	46.404644	4
ATAACGC	505	44.786575	3
GCATAGT	640	42.77928	2
GTATAAC	420	41.096455	1
AACGCAG	17335	38.09053	6
TAGTACT	740	36.99695	5
ACATGGG	17845	35.221104	3
TACATGG	18150	35.15392	2
GTACATG	18185	35.0208	1
GTATCAA	18630	34.120396	1
CGCAGAG	19670	33.56885	8
CATGGGC	5110	33.428482	4
ACGCAGA	19810	33.33162	7
CATGGGT	1845	32.90481	4
CATGGGG	4455	32.86571	4
AGATTAC	725	32.017117	2
GCAGAGT	20720	31.896439	9
CATAGTA	915	30.572601	3