SRR3557426.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557426.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4359783
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	53716	1.232079670020274	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24502	0.5620004481874442	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20272	0.46497727065773686	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9163	0.21017101080489559	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	6580	0.15092494282398916	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6567	0.1506267628457655	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	6171	0.14154374197064395	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	6032	0.13835550989579068	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	5821	0.13351581948000624	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5116	0.11734528989172166	No Hit
GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA	4786	0.1097761058291204	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	4722	0.1083081428594038	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	880	41.254654	1
GTATCAA	52315	40.886284	1
AACGCAG	54395	39.87257	6
CATGGGT	9155	35.558613	4
CGCAGAG	61550	35.32449	8
ACGCAGA	61395	35.297398	7
TATCAAC	60605	35.243645	2
ATCAACG	61330	34.710575	3
TCAACGC	62785	34.18107	4
CAACGCA	63420	33.80013	5
GCAGAGT	64945	33.450424	9
ACATGGG	53810	31.730972	3
TACAACG	755	31.530357	2
ATGGGTG	5035	31.440035	5
GTACATG	56050	31.291782	1
TACATGG	56175	31.147276	2
GTACTGG	2970	30.258423	1
CATGGGG	14915	29.926355	4
ATAGTAC	1300	28.841179	4
TAACGCA	810	28.65467	4