SRR3557369.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557369.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2757988
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	33812	1.2259661753423148	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18999	0.6888717427341962	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13872	0.5029753573982193	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6967	0.2526116864902965	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	6156	0.22320619234021322	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	4705	0.17059537604949696	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4689	0.17001524299598114	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4601	0.1668245112016441	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	4253	0.15420661728767493	No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGAT	3930	0.14249518126982422	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCATTTT	3930	0.14249518126982422	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	3739	0.1355698429434791	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3503	0.12701288040412068	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3236	0.11733191007357537	No Hit
GTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAAAAAAAAAAAAAAA	2996	0.10862991427083803	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	2834	0.1027560671039903	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	655	48.172153	1
TACAACG	520	43.475285	2
GTACTGG	2490	41.60173	1
GTATAAC	860	41.535007	1
TACTGGT	2350	40.75869	2
TATCACG	470	39.23973	2
TAACGCA	800	38.670124	4
ATAACGC	935	38.177	3
GGTTCAC	2480	37.18011	6
ACAACGC	615	36.75959	3
AACGCAG	34275	35.944572	6
ACATGGG	33930	35.73407	3
GTACATG	35290	35.544662	1
TACATGG	35285	35.508343	2
CATGGGG	8475	34.958424	4
CATGGGT	3585	34.68321	4
ACTGGTT	2740	34.305893	3
CATGGGC	8015	34.292618	4
GTATCAA	34125	34.106377	1
ATCTACG	560	33.995712	2