SRR3557366.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557366.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8686091
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	154961	1.7840130848272253	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	75857	0.8733157412235262	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	58420	0.6725695137202684	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25919	0.29839659750283526	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	18946	0.21811882928696003	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	17842	0.20540885422452976	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	15765	0.1814970623724757	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	14923	0.17180340385565843	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14855	0.17102054307282757	No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGAT	13071	0.15048196018208881	No Hit
GTATCAACGCAGAGTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAA	11239	0.12939076967994004	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10732	0.12355385178442178	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9706	0.11174186409053277	No Hit
TATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCA	9163	0.10549049048645702	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCATTTT	9091	0.10466157906934201	No Hit
CTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATT	8937	0.10288862964940154	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC	8853	0.10192156632943404	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	110075	49.407818	1
AACGCAG	122085	45.103397	6
TATCAAC	133700	40.65794	2
ATCAACG	136115	39.783592	3
ACGCAGA	139195	39.48658	7
CGCAGAG	139645	39.371437	8
TCAACGC	139430	39.20895	4
CAACGCA	141310	38.71876	5
GTACTGG	7930	37.46305	1
GCAGAGT	146815	37.456757	9
ACGGTAC	2815	35.928883	3
TACTGGT	7860	35.72668	2
GGTTCAC	8295	32.84712	6
GTACATG	111320	32.056736	1
CATGGGT	12305	31.910637	4
TACATGG	111975	31.831085	2
ACATGGG	110335	31.759611	3
GGTATCA	62885	31.62097	1
CGCATAG	1320	31.57184	1
ACTGGTT	8935	30.69584	3