SRR3557345.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557345.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3195692
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	40799	1.2766874905341314	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22285	0.6973450507746054	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15917	0.49807678587298154	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8304	0.2598498228239768	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5848	0.18299635884809926	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5404	0.16910265444855135	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	5028	0.15733681468677205	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4513	0.14122136926837756	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	4357	0.1363397974523202	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4064	0.12717120423369963	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	4027	0.12601339553373728	No Hit
GTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAAAAAAAAAAAAAAA	3677	0.11506115107463423	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	3662	0.1145917691692441	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3333	0.1042966593776872	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCATTTT	3266	0.10220008686694462	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	760	65.805145	1
TACAACG	585	41.696793	2
AGATTAC	1570	40.547005	2
TATCACG	520	40.044178	2
AACGCAG	38675	40.02499	6
TAACGCA	815	39.41947	4
TAGTACT	1385	38.229137	5
ATAGTAC	1385	37.801373	4
GTATCAA	40720	36.670254	1
GCATAGT	1380	36.644978	2
TCACGCA	595	35.996494	4
ACGCAGA	43785	35.353813	7
ACAACGC	710	35.193752	3
CGCAGAG	44170	35.166874	8
CATGGGG	10760	34.944553	4
GTACATG	39700	34.53803	1
ACATGGG	38820	34.390778	3
TACATGG	39955	34.203026	2
GATTACT	1900	33.50463	3
GCAGAGT	46530	33.40878	9