SRR3557337.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557337.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6778192
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	66986	0.9882576356644958	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	36021	0.5314248991471472	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24423	0.3603173235576685	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12468	0.18394285673819802	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	9392	0.13856202361927783	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	9100	0.1342540901762594	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	9095	0.13418032419264606	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7967	0.11753871828947896	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7147	0.10544109697689297	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	7117	0.10499850107521297	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	55910	41.567303	1
AACGCAG	59820	39.68098	6
CGCATAG	1250	37.622585	1
ACGCAGA	67615	35.071163	7
CGCAGAG	68330	34.730045	8
TATCAAC	67220	34.50931	2
ATCAACG	67080	34.41282	3
TCAACGC	68570	34.046806	4
TACAACG	1130	33.69637	2
GTACATG	60235	33.572075	1
CAACGCA	69760	33.566383	5
ACATGGG	58915	33.537025	3
TACATGG	60900	33.264526	2
GCAGAGT	72870	32.623417	9
CATGGGG	19030	30.91997	4
TACTGGT	4660	30.385935	2
GTACTGG	5340	29.653223	1
ACGGTAC	1535	28.6817	3
CATGGGT	7515	27.867323	4
AGAGTAC	71455	27.670424	10-11