SRR3557210.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3557210.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5105192
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	42782	0.8380096184433417	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22315	0.4371040305633951	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18892	0.37005464241109837	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9053	0.17732927576475085	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	8232	0.16124760831717985	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	6506	0.12743888966369923	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6035	0.11821298787587226	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5621	0.11010359649548929	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	1220	53.1574	1
TAACGCA	1370	39.517376	4
TACAACG	1070	37.809128	2
ACAACGC	1180	32.771996	3
TATCACG	690	31.90246	2
AACGCAG	60580	31.052736	6
AGATTAC	2710	30.73479	2
TAGTACT	2215	30.619522	5
GTATAAC	2005	29.67445	1
ATAACGC	2020	29.452364	3
GTATCAA	61380	29.32213	1
CATGGGG	13745	29.259657	4
TCACGCA	885	28.906298	4
CGCAGAG	67220	28.029596	8
ACGCAGA	67065	28.005669	7
ACATGGG	54635	27.713308	3
ACGGTAC	930	27.507874	3
GCATAGT	2415	26.852264	2
GATTACT	3090	26.762573	3
GCAGAGT	70560	26.702799	9