SRR3556748.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3556748.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4095428
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	72248	1.7641135431998805	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	34107	0.8328067298460624	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27576	0.673336217850735	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15912	0.3885308202219646	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	11250	0.27469656407095916	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	8660	0.21145531065373388	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	7413	0.18100672261849066	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6992	0.17072696675414634	No Hit
GTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAAAAAAAAAAAAAAA	6192	0.1511929888646559	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5903	0.1441363393520775	No Hit
GTATCAACGCAGAGTACATGGGCTTTTGTGATGAAGATGGGAGGGGGAAA	5746	0.14030279619126498	No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5650	0.13795871884452615	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	5442	0.13287988459325864	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	5250	0.12819172989978092	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAA	4971	0.12137925511082114	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	4427	0.10809615014596766	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4294	0.10484862632183986	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	4189	0.10228479172384425	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	1155	71.6433	1
TACAACG	850	53.869427	2
ATAGTAC	1795	45.38151	4
GCATAGT	1875	44.718624	2
TAGTACT	1860	43.156246	5
ACAACGC	1175	40.484695	3
AGATTAC	2170	38.365322	2
AACGCAG	68370	37.569984	6
TCACGCA	910	37.243996	4
TAACGCA	1060	36.461147	4
GTACAAC	1305	36.03789	1
TATCACG	955	35.492947	2
ATAACGC	1100	34.596012	3
CATAGTA	2440	34.36118	3
AAACGCA	1475	33.861805	5
GTATCAA	74410	33.513657	1
GTATAAC	1250	33.337326	1
CGCAGAG	77325	33.257458	8
ACGCAGA	77510	33.07835	7
GATTACT	2500	33.060814	3