SRR3129008.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3129008.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8135202
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	326523	4.0137048840336105	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	28571	0.3512020967641615	No Hit
CGCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCT	18389	0.22604232814378797	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCT	18297	0.2249114404288916	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTT	18017	0.22146960825312018	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	13449	0.16531857475696363	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	11080	0.13619821609838328	No Hit
CGTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTC	8783	0.10796289999928704	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8705	0.1070041038931793	No Hit
CCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTG	8563	0.10525860328975235	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTC	8489	0.10434897621472705	No Hit
ATGATGGTTACAATGAAGGAGGAAATTTTGGCGGTGGTAACTATGGTGGT	8224	0.10109152790551482	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	89200	90.000755	1
ATAGGGC	3870	72.4023	3
AGGGACT	16240	72.25809	5
GGTAAGG	4555	70.66034	1
ATAGGGA	5635	70.2827	3
GACTTAA	12400	68.9011	8
AGTAGGG	11885	68.588234	2
GTAGGGA	5680	68.56517	3
AGTAAGG	4640	67.43626	1
GTTTTTT	120230	66.95493	2
GGACTTA	13070	66.699455	7
TATAGGG	5345	66.696014	2
GGATAGG	4200	66.53478	1
AATAGGG	10215	65.83269	2
ACTTAAT	12875	65.77509	9
AAGGGGC	27000	65.61474	4
AGATAGG	3860	65.5587	1
AGGGAAT	7310	65.189026	5
ATAGAGG	5245	65.13822	1
TAGGGAC	3670	64.67119	4