SRR3129006.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3129006.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8107761
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	304221	3.752219632522468	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	28743	0.3545121766662831	No Hit
CGCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCT	18769	0.23149424360190193	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCT	17862	0.2203074313611366	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTT	17722	0.2185806907727053	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	13149	0.1621779428377329	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	11024	0.13596848747761558	No Hit
CGTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTC	9220	0.11371820160954423	No Hit
CCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTG	8897	0.10973436439480641	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTC	8491	0.10472681668835576	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCC	8190	0.10101432442322857	No Hit
ATGATGGTTACAATGAAGGAGGAAATTTTGGCGGTGGTAACTATGGTGGT	8145	0.10045930066266137	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	83710	89.389534	1
ATAGGGA	5505	72.309326	3
ATAGGGC	4150	71.684265	3
AGGGACT	16680	71.22775	5
GGTAAGG	4175	69.541	1
GACTTAA	12460	68.797874	8
AGTAGGG	11710	68.26172	2
AGATAGG	4040	67.90464	1
GTAGGGA	5640	67.49539	3
TATAGGG	5660	66.37669	2
GTTTTTT	113625	66.36015	2
GGACTTA	13095	66.35897	7
AATAGGG	10015	66.34015	2
AAGGGGC	27135	66.29951	4
GGATAGG	4365	66.29841	1
AGTAAGG	4895	66.137535	1
GTATAGG	2535	66.08217	1
ATAGAGG	5195	66.03197	1
ACTTAAT	12990	65.84616	9
TAGGGAT	3795	65.75836	4