SRR3129005.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3129005.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9737556
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	375139	3.8524964580434764	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	34937	0.35878612662150544	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCT	20216	0.20760856214844878	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTT	19183	0.19700015075651425	No Hit
CGCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCT	17996	0.18481023369724395	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	16343	0.1678347215666847	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	13444	0.13806339085495375	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10968	0.11263606596973615	No Hit
ATGATGGTTACAATGAAGGAGGAAATTTTGGCGGTGGTAACTATGGTGGT	9781	0.10044614891046584	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	100975	89.23177	1
ATAGGGC	4675	71.806274	3
AGGGACT	20835	71.57897	5
AGTAGGG	14500	70.20518	2
GGATAGG	5630	68.78262	1
ATAGGGA	6885	68.62904	3
GACTTAA	15850	68.34185	8
ATAGAGG	6455	67.499725	1
TAGGGAT	4710	67.479805	4
GGTAAGG	5020	67.39264	1
AAGGGGC	32695	66.62373	4
GTAGGGA	7165	66.20957	3
GGACTTA	16565	66.18634	7
TATAGGG	7005	65.98187	2
AGATAGG	4665	65.66238	1
ACTTAAT	16440	65.51758	9
GTTTTTT	138280	65.44598	2
TAGGGAC	4615	64.99755	4
GAATAGG	5840	64.21445	1
AATAGGG	12790	64.187874	2