SRR3128650.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128650.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2098341
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20260	0.9655246692506128	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	5423	0.2584422646271507	No Hit
GCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTG	4751	0.22641696464016098	No Hit
CCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTG	4412	0.21026134455743847	No Hit
CTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTGC	3912	0.18643299635283303	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCATGCCTGT	2324	0.11075416245500613	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	6135	82.00127	1
AAGGGTA	1360	74.64178	4
CTACGAC	1125	73.52368	5
AGTAGGG	2805	72.5855	2
CGTAGGG	525	72.54719	2
TAGGGCA	980	72.413246	4
AGGGTAT	1365	72.30258	5
AGGGATG	2955	70.77334	5
GTAGGGC	805	70.64097	3
AGGGAAT	2510	70.58863	5
TACGACC	1180	69.69846	6
AAGGGCA	2995	69.671196	4
ATAAGGG	2580	69.43848	2
AGAAGGG	6190	68.594925	2
ATAGGGC	1145	68.54537	3
GTACGGG	380	68.05718	2
CGAAGGG	1955	67.58564	2
TAAGGGA	1725	67.56623	3
AGGGTAA	930	67.2103	5
TAAGAGG	1430	67.1354	1