SRR3128646.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128646.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2245490
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18247	0.8126066025678138	No Hit
GCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTG	4348	0.1936325701739932	No Hit
CCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTG	4081	0.18174206965962886	No Hit
CTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGC	3495	0.15564531572173557	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3169	0.14112732632966524	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCAGTTGTGG	2847	0.12678747177676142	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2364	0.10527768994740569	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2297	0.10229393139136671	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	6315	81.387985	1
CGTAGGG	655	73.895706	2
TAGGGTA	825	73.47829	4
GAATAGG	1360	72.95533	1
TAGGGCA	975	72.777245	4
TATAGGG	1580	71.38015	2
GGTAAGG	1300	70.89673	1
ACGGGAT	725	70.00177	4
GTAGGGC	955	69.87281	3
CCGTACA	1405	69.56812	3
AGTAGGG	3225	69.06721	2
ATAGGGA	1770	69.02769	3
TAAGGGA	1630	68.61398	3
AGGGAAT	2440	68.56504	5
GGAGCTA	4735	68.48126	9
AGGGATG	2645	68.4034	5
ATAGGGC	1120	68.39004	3
AGTACGG	355	67.554665	1
AGTTAGG	585	67.5207	1
AGAGGGC	3000	67.511734	3