SRR3128560.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128560.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2457411
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17601	0.7162416054945632	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	14720	0.59900439934549	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	3966	0.16138936466061232	No Hit
GCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTG	3654	0.1486930757614416	No Hit
CTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC	3533	0.14376919448964784	No Hit
CCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTG	3514	0.14299602305027526	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCAAT	2940	0.11963810693449327	No Hit
AGGGACCTGTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTA	2678	0.10897647971788195	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	6825	85.777794	1
CGCTACG	2580	84.88671	3
GCTACGA	2645	82.97833	4
CGTAGGG	665	82.73086	2
AGGGATG	7855	81.310524	5
CTACGAC	2705	81.13778	5
ATAGCGG	430	80.987946	1
TAGCGGG	1040	80.93251	2
ACGACCA	2655	80.36461	7
CGACCAA	2670	79.56108	8
TCCGCTA	2760	79.28682	1
CGAAGGG	2205	78.26377	2
GGATGGC	5345	77.7281	7
AAGGGAT	7455	77.162674	4
AGCGGGA	2330	77.051476	3
CGGGATG	1555	76.767395	5
CGAGGGA	1735	76.38765	3
GCGGGAT	1705	76.353485	4
TACGGGT	235	75.99574	3
AGGGATC	2685	74.915726	5